Showing posts with label Recommendations. Show all posts
Showing posts with label Recommendations. Show all posts

31 May 2023

Beshrew my heart but I pity the man. Final reflections on From Extraterrestrials to Animal Minds by Simon Conway Morris

I've reviewed a few books over the years here at Quintessence of Dust, but From Extraterrestrials to Animal Minds: Six Myths of Evolution by Simon Conway Morris was the first book I blogged through that I was genuinely excited about reading. I bought it sight unseen, new and in hardcover, from a publisher of dubious reputation, because I was beguiled by the author and the title and what I mistakenly believed that title to mean. I have already written that I regretted paying money for the book once I read the first couple of chapters and realized I'd been had. From Extraterrestrials to Animal Minds isn't about myths, nor is it about interesting controversies, and its ideas/claims are mostly recycled from previous works by the author. In retrospect, the book didn't merit the attention I gave it, and it doesn't merit yours.

David Strathairn and Sophie Marceau as Theseus and Hippolyta in A Midsummer Night's Dream (1999)

But that doesn't mean I regret the exercise as a whole. Writing my way through the book helped me clarify some of my own thoughts and ideas. So this post is as much about me and my ideas as it is about the book.

19 June 2009

Weekly sampler 24

1. Get your genome sequenced for $48,000. I would so do this. In the meantime, we bought the Matheson family DNA test for my dad for Father's Day.

2. I'm following this series at Siris: Philosophical Sentences explained. You know the old chestnuts: Cogito ergo sum, God is dead, virtue is its own reward, cleanliness is next to godliness... heh. Brandon tells us where they came from and a little about them. Latest installment is Santayana's famous quote etched at Dachau.

3. A very cool illusion that, like all good ones, tells us something interesting about how the brain processes visual information. Don't click till you're ready to follow these instructions: display the image on your computer screen so that you can slowly back away from the screen and still see the image. The idea is to view it up close then back up at least a few meters.

4. Two of my favorite bloggers, John Lynch (of Satan's University) and John Wilkins (from Down Under) have left ScienceBlogs and set up shop independently. Lynch formerly blogged at Stranger Fruit and his new place is called a simple prop. Wilkins is an important antidote to brainless anti-religious bellowings from Coyne and like-minded simps. Both are skeptics who know a lot about evolution. Recent important posts: Lynch on The Roots of ID and Wilkins on The Demon Spencer.

5. Strangest species discovered in the last year. The ghost slug wins for weirdness, but the big news is that someday we might be able to drink decaf that's still coffee.

6. Becoming Creation is an important blog by a homeschooler, evolutionary creationist, accomplished biologist and good guy: Doug Hayworth. Up right now is an interview with Denis Lamoureux, author of Evolutionary Creation.

7. A recent piece in the Chronicle of Higher Education presents a very interesting take on teaching science in the context of religion (and other social influences). The concluding paragraph:
Science professors should explicitly engage the rich social and ethical context of the subjects that they teach, engaging new generations of students in the science that so many now fear and reject. A careful, thoughtful approach to teaching the sensitive issue of evolution represents merely the beginning of a challenging, less-traveled-by path, but one that could, nevertheless, make all the difference.
8. My research concerns some very interesting proteins called formins. Michael Behe's scholarship includes a focus on the malaria parasite, P. falciparum. A recent paper reports that a formin protein in P. falciparum is critically involved in the process by which the parasite invades red blood cells. I always knew that Professor Behe and I were destined to be collaborators.

10 June 2009

Theistic embryology: the talk

I previously posted the abstract of a talk I gave at Calvin last month in which I test-drove my "theistic embryology" metaphor that I'll present at the North American Paleontological Convention in Cincinnati in two weeks. Now the audio and my simple slides are posted on Calvin's e-zine, Minds in the Making. Lots of jokes. And now my name's spelled right.

About halfway through, I refer to "10 dangers of theistic evolution" at Answers in Genesis. Later I read from Jerry Coyne's steaming pile. And speaking of steaming piles, I then read from one of my favorite posts in The Cesspool. In case you wanted to follow along.

12 May 2009

Theistic embryology controversy: a developing story

Get it? Heh. Anyway, go to Clashing Culture to see further discussion of the TE test.

09 May 2009

Weekly sampler 23

Okay, so not really weekly.

1. John Farrell has an interesting discussion of protein folding as a problem or challenge for evolutionary theory. His post includes quotes from experts with whom he has corresponded, and he cites the primary literature. (You know, peer-reviewed research articles written by people who are actually trying to understand the biochemistry of an early earth.) Here he's quoting Nick Matzke:
Even the very first polypeptides were pretty certainly not assembled all-at-once-from-scratch from a pool of 20+ kinds of amino acids in even proportions, in D- and L-form, as creationists and various beknighted physicists blithely assume. Probably the first time a proto-tRNA grabbed an amino acid and made a short chain, the chain was composed of glycine and few common hydrophobic amino acids and was quite short. Cavalier-Smith (2001) suggests that the original function may have just been a hydrophobic tail for association with a membrane. All of the improbability statistics are irrelevant in this sort of scenario, chirality isn't an issue, etc.
Let's go with 'benighted' lest anyone confuse an ignoramus in Glendora, California with, say, Sir John Polkinghorne.

2. I never really finished my junk DNA series, but there's still work to be done: falsehoods about non-coding DNA are beyond rampant. Recently at Adaptive Complexity, Michael White scored a direct hit on one of the major issues in this bogus controversy, and as usual it's a basic scientific principle (in this case, the concept of a null hypothesis). His post is required reading for those interested in any aspect of evolutionary genetics and especially those who have seen the standard genomic arguments of intelligent design creationists. Hat tip: Sandwalk.

3. Christians (and others) will find ThinkChristian.net interesting and provocative. I'll be writing there regularly starting this month. About science. And stuff.

4. Alister McGrath on Augustine on Darwin. His (very) basic point is a good one and he equivocates at the right times. But he seems to be allergic to randomness. After mentioning Augustine's emphasis on "divinely embedded causalities," he claims that "Augustine has no time for any notion of random or arbitrary changes within creation." More specifically, McGrath explores notions in Augustine's The Literal Meaning of Genesis that sound like ideas from a thoughtful design advocate. (Ideas, I'll add, that were articulated just as well by Howard Van Till in a slightly different context.) But, like most design proponents, he inveighs against randomness and then identifies it with Darwin:
Augustine would have rejected any idea of the development of the universe as a random or lawless process. For this reason, Augustine would have opposed the Darwinian notion of random variations, insisting that God's providence is deeply involved throughout. The process may be unpredictable. But it is not random.
I wonder if McGrath has thought hard about this. He may be right about Augustine, but I think it's a mistake to take such a hard line against "random variations." Why do so many people think that "embedded causality" is inconsistent with "random variation"? I don't get it.

5. And speaking of randomness, our reading group ("Random Readers") recently tackled some articles on determinism and evolutionary theory. We focused on a paper by Roberta Millstein titled "How Not to Argue for the Indeterminism of Evolution: A Look at Two Recent Attempts to Settle the Issue.” The "attempts to settle the issue" were responses to a paper that Millstein describes as a "full fledged defense of evolutionary indeterminism" that put the debate over evolutionary determinism "into high gear." That paper is "The Indeterministic Character of Evolutionary Theory: No 'No Hidden Variables' Proof But No Room for Determinism Either" by Robert N. Brandon and Scott Carson. Wait, Scott Carson? Yes, the same Scott Carson who writes one of the blogs I regularly follow: An Examined Life.

6. An answer to the famous question, "What is it like to be a bat?" Hat tip: Very Short List.

15 February 2009

Weekly sampler 22

It was a week of celebration and remembrance. There was a major birthday. And celebrations of that day of the first fruits of bigger things, in unlikely places like Florida and Arizona. It's all very exciting.

1. So... you're tired of reading about why Darwin is [God/Satan/Abe Lincoln/Howard Stern] or whether Darwinism is [Nazism/Atheism/True religion/ID codeword]. You'd rather read about what evolutionary biologists are doing today, and what real scientists think of Darwin and his ideas, but you don't have access to most academic journals. Take heart! There are some very good free resources that have been posted in celebration of Jason Varitek's signing, and here are some that I think are worth a visit:
2. Randy Isaac (executive director of the ASA) has been providing reports from the AAAS annual meeting in Chicago, focused on topics of interest to ASA folks. He attended a symposium on human origins and posted comments on the ASA email list.

3. The Vatican will be holding a conference on evolution next month, and reports indicate that ID will get a very critical eye. Via John Farrell.

4. At the end of the month I'll be in Dayton, Tennessee to participate in an interesting Darwin-themed event at Bryan College and to hang with my friend Todd Wood. (Ted Davis is another speaker.) I hope to have a Scopes trial-centered tour as well. And in June I'll be giving a talk in a symposium at the North American Paleontological Convention in Cincinnati. I'll post the abstract here once it's accepted.

5. Siris on why Jerry Coyne should either stick to genetics or take a high school-level philosophy course.

6. More amazing illusions, again at Scientific American and again via Very Short List, but this time we have sculpted illusions of "impossible figures."

7. Gordon Glover has posted some lectures by Dennis Venema at Beyond the Firmament. Dennis is a professor at Trinity Western University in British Columbia and a fellow evolutionary creationist and ID skeptic.

01 February 2009

Mendel's Garden, 28th Edition

Hello and welcome to the 28th edition of the genetics blog carnival known as Mendel's Garden, where we celebrate blogging on topics related to anything touching on what Mendel discovered (or thought he discovered).

While reading these interesting and informative pieces, please think about work that should be featured in a future edition and/or blogs (like yours) that would serve well as future hosts.

So do tomato seeds get you excited? No? Oh. Well, they should, if you're at all interested in evolutionary genetics. Michael White at Adaptive Complexity explores some new findings in which evolutionary changes in seed size in tomatoes are explained to a large extent by variation in a single gene, pinpointed through the use of standard genetic crosses. He summarizes the work as "a clear case of natural genetic variation controlling the size of seeds, variation for evolution (or plant breeders) to work on when larger or smaller seed sizes are needed to adapt to a new environment." Not peas, but close. Mendel would be proud.

"Mendel would be proud" happens to be the title of a post by Michael at Ricochet Science, pointing to a new educational site which he hopes will help students and laypersons learn genetics.

Ouroboros describes experiments on an interesting DNA repair enzyme called Ercc1. One might think that deletion of the gene encoding this protein (it controls nucleotide excision repair) would be a Bad Thing, but in fact mice that have been so altered are strikingly cancer-resistant. And there's more, but you'll have to check out the excellent Ouroboros blog (focused on aging and related biology) yourself.

At the Spittoon, Erin introduces her post entitled "Miss Con-GENE-iality" with this teaser: "If Facebook is starting to take over your life, maybe your genes are partly to blame." The subject is heritability of various aspects of social connectedness, and instead of whining "I could quit Facebook anytime I want" just go read about these new genetic analyses of our social behavior.

On a more serious note, Razib at Gene Expression explores the genetics that might underlie the interesting case of Sandra Laing, a woman born to apparently white parents but who appeared to be "of a different race." And in South Africa. For more on the genetics of human appearance, see the Eye on DNA interview with Dr. Tzung-Fu Hsieh, developer of a test for the red hair gene.

Oh, and before you give your credit card number to a personal genomics outfit, spend some time at Genetic Future – Daniel notes when a company is charging too much, and comments on some recent remarks by Francis Collins on the future of "consumer genetics."

Organic transgenic food might sound like an oxymoron, but Anastasia at Genetic Maize explains why it's not and introduces the new word for such methods: orgenic.

Jonathan Eisen at The Tree of Life is recruiting people to help with analysis of metagenomic data. Go there to learn more. I forgot to inquire about salary and benefits.

Back to evolutionary genetics: Todd at Evolutionary Novelties reports on an extraordinary example of evolutionary convergence, involving proteins called opsins which are best known for their roles in vision.

Need more evolution (with genetics)? Go read about pink iguanas at Nothing's Shocking. This should get you thinking about speciation, and that means it's time to read about "speciation genes" at Evolving Thoughts. John's not crazy about the term. What a grouch.

And here's a new twist on the whole "species boundary" concept: Ed at Not Exactly Rocket Science writes about a single gene in glowing bacteria that accounts for the ability of the same bacterial species to colonize (in a mutualistic relationship) two completely different organisms (pinecone fish with glowing "headlights" and squid with a luminous "cloaking device"). Now that's cool.

Let's give the Digital Cuttlefish the last word, at least because the blogosphere recently treated us to intensely disturbing images of cuttlefish meeting violent ends. At that little piece of blogospheric heaven, the Digital Cuttlefish reports on the cuttlefish genome project. It's not what you think – it's better.

Thanks for reading, and look for the next edition of Mendel's Garden the first Sunday in March at Biofortified.

28 December 2008

Weekly sampler 21

Well, it's the first sampler since June, but I won't try to make up for lost time.

1. Todd Wood has started a blog, and it's excellent. His slant is unique -- he's a young-earth creationist -- but his writing is superb and his expertise in genetics and genomics is world-class. My favorite entry so far: a commentary on a recent report describing genetic variation among humans. The most recent post deals with the principle of accommodation and one of its Enlightenment defenders, one John Wilkins. Todd hasn't activated comments, so expect a journal and not a conversation. But have a look, and consider the gigantic difference between Todd's work and Mike Behe's. There's just no comparison, and Todd is an example of why one should not grant respect based solely on someone's willingness to accept an ancient universe or universal common descent.

2. Okay, best segue ever. Speaking of John Wilkins, Evolving Thoughts (a blog at ScienceBlogs run by a philosopher of biology) has some very interesting recent posts defending "theistic evolutionists" like me. Back in September, he discussed "Darwin, God and chance" and concluded:
Why does this matter beyond a bit of mental gymnastics, especially since I am not a theist? Well it has one rather significant implication: it means that those who criticise theistic evolutionists (like Asa Gray) for being inconsistent or incoherent are wrong: it is entirely possible to hold that God is not interventionist, and yet hold that God desired the outcomes, or some outcomes, of the world as created. In simpler terms, there's nothing formally wrong with believing the two following things: 1, that God made the world according to a design or desired goal or set of goals; and 2, that everything that occurs, occurs according to the laws of nature (secondary causes). In other words, it suggests that natural selection is quite consistent with theism, solving a problem I discussed earlier.
Read the whole post to see how he arrived at this conclusion, and don't miss the work of his collaborator, one Phil Dowe. More recently, Wilkins has summarized the "theistic evolution" position as he sees it, and reiterated his contention that the position is not incoherent. (Well, duh, but there are plenty of axe-grinding nitwits who assert just that.) I'll discuss these ideas in a separate post soon; in the meantime, pay Wilkins a visit.

3. Steve Martin's blog An Evangelical Dialogue on Evolution has become the blogospheric world headquarters for multilateral discussion of evangelical approaches to the theological understanding of evolution. The most recent series tackled questions of evolution and original sin, centered on an article by George Murphy and featuring responses by Terry Gray, Denis Lamoureux and David Congdon. Congdon's blog, The Fire and the Rose, is one of my favorites.

Left, the human eye as sketched by Descartes. Right, the eye of a fruit fly as revealed by scanning electron microscopy. Courtesy of Wellcome Images, Creative Commons license.

4. The most recent issue of Evolution: Education and Outreach is devoted to the evolution of eyes. And it's all free. Includes an introduction by Ryan Gregory, who also points us to an issue of The Lancet that focuses on evolution. Sheesh, is there some kind of anniversary coming up? :-)

5. Illusions of various kinds are something of a hobby of mine. Hence my interest in an online collection of kinetic optical illusions at Scientific American (meaning that the images produce an illusion of movement). Something else that's cool about the collection: some of the illusions were created (or discovered) by Donald MacKay, a Christian neuroscientist who has influenced me and many of my colleagues through his vigorous and uncompromising approach to the relationship between science and Christian faith. (We read part of his Science, Chance and Providence in our randomness reading group.) Make sure you look at the third image -- it's the infamous Enigma illusion.

6. Here's another kind of illusion that is interesting and informative: synesthesia, in which a perception (such as smell or color) becomes associated with a seemingly unrelated experience (a number or a different sensation). V.S. Ramachandran devoted one of his Reith Lectures to this phenomenon, which he described as "mingling of the senses." A new report describes a new version: touch-emotion synesthesia, in which certain textures evoke particular emotions. The proposed explanation for how these peculiarities is worth a look, too.

7. Using bumps in the road to make music. It'll be a clue in National Treasure 3, you just wait. Note that this link comes courtesy of Very Short List, which is a delight.

8. Deb and Loran Haarsma's excellent book Origins got a nice review at the Reports of the NCSE. I'll write one of my own sometime this spring. When the next issue of RNCSE goes online, I hope it will include my review of Gordon Glover's Beyond the Firmament.

9. The most recent (January 2009) issue of Scientific American is all about evolution. Larry Moran has some typically excellent comments over at Sandwalk, addressing pop evolutionary psychology [gag], testing natural selection, and why everyone should learn evolution.

10. Now off to enjoy one of our family's holiday traditions, this time with a mix of Scotch and rum.

16 November 2008

Critiquing Nature's Destiny by Michael Denton, Part I

I've mentioned before that we've had an intelligent design proponent (code named Timaeus) as an official guest on the ASA email list. The discussion has been mostly useful. One thing that became clear early on was the fact that Timaeus is not a scientist and has not read much science outside of the works of ID defenders. His repeated and enthusiastic citation of Michael Denton led some to request commentary on Denton's work, by knowledgeable scientists. This is my contribution.

Timaeus has made frequent mention of the work of Michael Denton, who has written two books that are popular among ID sympathizers. The first, Evolution: A Theory in Crisis, was published in 1985 and is regarded as a major influence on the early ID movement. The second, Nature's Destiny, was published in 1998 and seems to be far less influential. I recently read Nature's Destiny, and offer here a review in two posts. In this post, I present an overview of the book and its arguments, with a general critique and comments on the portrayal of the book by Timaeus. The second post (if I find time to collate it) will contain more detailed comments on technical aspects of Denton's claims in areas of my expertise. In separate posts, I will comment on Evolution: A Theory in Crisis (henceforth abbreviated as ETC).

Overview

Reading Timaeus' characterizations, one might reasonably suppose that Michael Denton has written books that demolish "Darwinian evolution," in ways not seen before and not answered (or answerable) by evolutionary biologists. Timaeus asserts, for example, that Denton "rips the Darwinian mechanism to shreds, armed with thousands of references to the latest knowledge in biochemistry, genetics, embryology, physiology, comparative anatomy, etc." And that quote clearly refers to Nature's Destiny.

This is a very serious mischaracterization of Denton's work. Denton did attempt, in ETC, to undermine "Darwinian evolution" – unsuccessfully, as I will explain elsewhere. In Nature's Destiny, his project is wholly different. Nature's Destiny seeks to defend a law-based, teleological view of cosmic history in which the development of humanity is the ultimate goal. The view is non-Darwinian for sure, in the sense that such strong teleological conceptions are non-Darwinian by definition. But any claim that Nature's Destiny does damage to modern evolutionary biology is a significant distortion. In fact, I would be most interested in a conversation with Michael Denton, both because I find his work intriguing and because I would be quite curious to hear his response to Timaeus' triumphalistic pronouncements regarding his ideas. Specifically, I wonder if Denton believes that he has "shredded" the "Darwinian mechanism," and whether he would acknowledge that many of the challenges he raised in his first book have failed completely in the face of vast amounts of data arising from completely new biological subdisciplines. (More on this in a future post on ETC.) My point is not that I think Denton is a fool, but that on the contrary I'm pretty sure he'd be embarrassed by the propagandistic ends toward which his ideas are being employed. (Perhaps there is a clue here regarding his divestiture from the Discovery Institute.)

I found Nature's Destiny to be mostly interesting, occasionally informative, occasionally exasperating, and ultimately unpersuasive. Ominously, I found that the chapters I judged to be the weakest were the chapters on topics I know the best. I suspect that cosmologists, physicists, biophysicists and perhaps chemists would feel the same way. In any case, I hasten to add that I have not concluded that Denton is wrong or that his failure to assemble a convincing case is somehow evidence to the contrary. His book is far stronger than Behe's Edge of Evolution, and unlike that unacceptably misleading and inaccurate work of folk science, Denton does not invite speculation that he is willing to abuse science in the course of metaphysical argumentation. Nevertheless, there are times when he's clearly trying too hard, and this is one of my main criticisms of the work.


Nature's Destiny does not attempt to destroy "Darwinism." It attempts to defend a "teleological religious concept of the cosmos as a specifically designed whole, with life and mankind as its primary goal and purpose." (p. xi) As Denton describes in his autobiographical account in Uncommon Dissent and in the prologue, the book can be viewed as an updating and expanding of a classic work by Lawrence Henderson (The Fitness of the Environment, 1913) that describes the ways in which the cosmos (specifically its chemistry) is remarkably fit for life. As Denton puts it in Uncommon Dissent (p. 168), Henderson demonstrated that
there is clear evidence that some adaptive fitness is given from within. This is adaptation "for free" arising out of the intrinsic properties of matter...
It may be that some forms of "Darwinism" cannot abide such talk, but those who think that consideration of nature's "eerie perfection" is somehow "anti-Darwinian" should read Simon Conway Morris. In fact, Conway Morris' Life's Solution is the book that every ID proponent should read after reading Nature's Destiny. Conway Morris' project overlaps with Denton's in obvious ways, and Conway Morris cites Denton twice, approvingly. But one never hears an ID propagandist brag that Conway Morris has "shredded the Darwinian mechanism." This, to me, is telling. I urge those who take Denton seriously to read Life's Solution. It simultaneously affirms Denton's basic view (that life is an inevitable result of the "laws" of the cosmos) while putting the lie to any claim that Denton or anyone else has undermined the theoretical foundation of modern evolutionary biology. If there is hope for ID as a serious intellectual movement, it lies in the deep cosmic concepts that unite the work of Simon Conway Morris and Michael Denton. But as long as ID propagandists believe that Denton has wrecked evolutionary explanation, they will purvey ignorance and confusion, and prolong the degeneration that gives us Casey Luskin and the disastrously bad Edge of Evolution.


Critique

1. As the articulation of a certain metaphysical view of the cosmos, Nature's Destiny works fairly well. As a defense of that view, it is wholly unconvincing, and I suspect that Michael Denton would understand my criticism. Nature's Destiny explores the notion of fine tuning and deep direction at every level of organization; it is not primarily a book about biological evolution. It begins with a standard retelling of the physics fine tuning story, then turns to some special examples of proposed fine tuning in chemistry. These chapters are fun to read, and contain very nice historical and scientific summaries on topics such as the properties of water, carbon and other elements, and gases. But even in these better chapters, and frequently in later chapters, careful readers will detect numerous instances of special pleading, and scores of arguments that go like this:
X is a really good thing for life. It is likely that X must be this way to enable biological function.
Or like this:
X is a really good thing for life. It seems there is no other way to do it, but somehow the cosmos found that way.
The key word is "seems." That word occurs over and over and over again, as do "likely" and "appears" and "perhaps" and "it may be," and in one sense it is a credit to Denton that he is careful not to overstate his case. (His admirers often lack this wisdom.) For this reason, it felt somewhat strange to read the book after seeing Timaeus' chest-beating.

The main impression I got from Nature's Destiny was this: Michael Denton is a Platonist who has a strong preference for typology and for teleological conceptions of the universe. To him, the universe seems to exist just for humans. And so everything he looks at is made to conform to this view. Now, this isn't meant to be an insult or a particularly damning criticism. I have some preferences and predilections of my own (I am decidedly not a Platonist, for example), and I would be a fool to claim that my views are unaffected by these precommitments. My point is that those of us who don't share Denton's somewhat odd viewpoint are able to see just how often his arguments and his choices are strongly affected by the momentum of his cause. To Denton, a lot of things "seem" to be extraordinary. Everything, to Denton, appears to be supremely and perfectly optimized, to the point that he must look for perfection (more accurately, fitness) in every aspect of biology and biochemistry. To me and to others, life just doesn't look like this at all.

And so I see much of Nature's Density as weird and extreme, containing speculations that range from reasonable to utterly off-the-wall, forced by a view of cosmic perfection that I don't embrace for various reasons. In chapter 13, "The Principle of Plenitude," the argument reaches a crescendo when Denton embraces the pre-Darwinian notion that all – or nearly all – possible life forms have been actualized on Earth. Phrases like "seems likely" and "difficult to see" appear multiple times on each page. The equivocation does not, to me, mask the odor of special pleading, which is strongest in the sections on biological evolution.

2. When critiquing "Darwinian" evolutionary mechanisms, Nature's Destiny offers nothing more than standard arguments from ignorance. Again, Nature's Destiny is not the demolition of Darwinism of Timaeus' caricature, but it does occasionally touch on the plausibility of Darwinian explanation. Denton offers nothing new or creative here, simply repeating arguments of the "it is difficult to see how" type. His descriptions of "spectacular adaptations" are enjoyable, but the argument is tiresome and weak. It should be unnecessary to make this point: one does not demolish – or even damage – evolutionary explanations by confessing one's personal incredulity.

This would be a good place to address another aspect of Timaeus' claim that Denton's work in Nature's Destiny "rips the Darwinian mechanism to shreds, armed with thousands of references to the latest knowledge in biochemistry, genetics, embryology, physiology, comparative anatomy, etc." The book contains about 600 notes, at least 1/4 of which are ibids. A few notes refer to more than one reference, but scores are to historical sources such as Darwin, Cuvier and Henderson, all of which are cited repeatedly. And more than half of the book is on fine-tuning topics (water, carbon, etc.) that didn't make Timaeus' list and don't concern the "Darwinian mechanism" as he obviously implies. To call Timaeus' statement an exaggeration is to be generous. The truth is that Denton makes relatively little reference to current science, and when he does he creates a mixture of interesting scientific commentary and shameless cherry-picking.

3. Like Behe, Denton peppers his descriptions of nature with effusive metaphors and confessions of wonder and awe. Cherry-picking and inaccuracies aside, these narratives are entertaining, educational and even inspiring. But they cannot take the place of the argument that needs to be made, namely the argument that adaptations, however spectacular or wonderful, are inexplicable outside of the preferred metaphysical framework. Denton overplays his hand in places, creating the impression that he is willing to substitute "shock and awe" for careful argument. Of course biology is cool. Of course it inspires awe. Not even Richard Dawkins would disagree with that.

So in summary, I found the book to be a bemusing and mostly unsuccessful attempt to defend a view of the cosmos built completely on commitments to typology, teleology, and law-based design. Unlike Behe's Edge of Evolution, the book lacks the sinister implication of deliberate duplicity, and contrary to certain propagandistic pronouncements, it neither attempts nor achieves a damaging critique of evolutionary theory. I recommend that Nature's Destiny be read as a metaphysical treatise, written with a distinctly apologetic angle, and that readers understand that it is characterized by special pleading. And I recommend that anyone who reads it follow up by reading Life's Solution by Simon Conway Morris. Both the overlap and the contrast are striking.

23 October 2008

How evolution can inspire faith

It is understandably typical for Christians to consider evolution as something that confronts and challenges faith. To say that North American evangelicals consider evolution to be largely incompatible with Christian belief is to state the painfully obvious. An evangelical who will just admit that common descent might be true is a progressive thinker, and much of the current discussion is dominated by attempts to push back on evolution by suggesting that it really isn't a completely accurate – or even minimally accurate – description of the development of life in God's world. Almost certainly because of perceived "incompatibilities," evangelical theological reflection on the implications of various scientific conclusions, specifically with regard to biblical interpretation, is regularly decried as dangerously inadequate. (Consider Peter Enns' recent review of a new book on the age of the earth by two of my most excellent colleagues. HT: David Opderbeck.) In other words, many thinking evangelicals are concerned about the lack of serious evangelical engagement of evolutionary theory.

But help is on the way. I've already mentioned Gordon Glover's wonderful Beyond the Firmament (and I reviewed it for the forthcoming issue of the Reports of the NCSE). I haven't seen Denis Lamoureux's Evolutionary Creation yet, but if it's as good as Mike Beidler says, then the landscape is looking a lot less barren. And now we have a very significant new voice in the conversation: my friend Daniel Harrell, associate minister at Park Street Church in Boston, a brilliant reformed preacher and gifted thinker whose ministry had a profound impact on myself and my family at a critical juncture in our spiritual lives. Daniel has written an excellent and interesting book on evolution and Christianity, and I give it my highest possible recommendation.

It's called Nature's Witness: How Evolution Can Inspire Faith, and you can buy it at Amazon or CBD right now. I read it a few months ago and blurbed it, and sometime in the next few months I hope to review it here. In the meantime, look for occasional comments and quotes. But for now, here's an excerpt from the Introduction, presented with permission from the publisher. In fact, this is the bulk of the Introduction, but the final paragraph is the paragraph I would have chosen to capture the essence of Daniel's approach and his project.
Walking across the Boston Common one cold winter’s eve, I was approached by a gentleman, somewhat agitated, who recognized me from church. “Are you the minister who’s writing the book on evolution?” This didn’t sound good. “Uh, ... yes?” I replied, bracing myself. “Do you believe in the word of God? Do you believe that God created the heavens and the earth in six days, like the Bible says?” His articulation was semiautomatic—as was his tone. I assured him that yes, I believed the Bible says that God created the heavens and the earth in six days. I also believe that rivers clap their hands and that mountains sing (Ps 98:9) because the Bible says that too. But I don’t think that the Bible means six twenty-four-hour days any more than I believe that the Bible means that rivers have literal hands. He worried that I suffered from delusion (which as far as I am concerned is never outside the realm of possibility). However, I reminded him that there are two types of delusion. There is the delusion that believes something that is not true, and there is the delusion that fails to believe something that is true. If evolution is an accurate description of the emergence of life, as science attests, then believing it alongside the Bible should pose no threat. There’s no need to fear any honest search for truth because in the end, all honest searches for truth inevitably lead back to God. Historically, religious faith, particularly Christianity, served as the loom onto which the discoveries of science were woven. It was within a Christian theological framework that scientific disclosure found its transcendent meaning. Descartes, Bacon, Galileo, Kepler and Newton, believers all, saw their work not as replacements for faith, but as extensions of it. The idea was that the best of science and the best of theology concerted to give human beings deeper insight into the workings of the universe and, subsequently, into the divine character. Scientific discovery was received with gratitude to the Almighty for the wonder of his creation. Scientists, alongside the psalmist, would proclaim, “The heavens declare the glory of God; the skies proclaim the work of his hands” (Ps 19:1 NIV). The balance between faith and science (or reason) was established in the Middle Ages by Thomas Aquinas. Aquinas, building on Augustine, established a delicate equilibrium between theology (reasoning down from faith) and philosophy, analogous to science (reasoning up from sensory data). Aquinas, unlike the Reformers who would follow, taught that human senses and rational faculties, as made by God, were competent for understanding reality, albeit from a limited standpoint. The limits were filled in by theology. Aquinas asserted that God acted through “secondary causes,” creating the world according to his laws and then giving nature room to unfold in accordance with God’s laws. Whatever was good science was good as far as God is concerned; science simply described what God had already done. However, if God operated mostly behind the scenes as the prime cause, then it wasn’t long before people started wondering whether he was there at all. In time, reliance upon divine revelation gave way to human reason in its Enlightenment form, and soon the supernatural was rendered superfluous. As science advanced, Christians reacted by retreating into a sort of Manichean dualism whereby science was demonized and faith grew reliant on a super-supernatural world where any ordinary explanation raised suspicion. With battle lines so starkly drawn, scientists were left to assume that any move toward Christian faith was akin to committing intellectual suicide. Conversely, the faithful relied on science for their medicine or the weather forecast, but much more than that was to attempt spiritual suicide. Let a spark of evolution in the door and you were liable to catch the whole house on fire. The controversy between Christian faith and evolution is exacerbated by increasing mounds of scientific data that lend weight to evolution. Paleontology, biochemistry, cosmology, physics, genetics—you name the discipline—each regularly puts forth newly discovered evidence in support of Darwin’s simple idea of descent with modification. While some people of faith choose to keep their doors closed, shutting out science is not necessary. Christian faith by definition defies human conceptions of reality (1 Cor 3:19). Its claims are grounded in extraordinary events that defy scientific explanation (most importantly the incarnation and resurrection of Jesus). But God is not only present where science is silent; he remains present even where science speaks loudest. The expansiveness of the universe, the beauty and complexity of organic life and the remarkable makeup of human consciousness—naturally explicable occurrences—are also interpreted by Christians as manifestations of God (Rom 1:20). Christianity consistently asserts that all truth is God’s truth, implying that faith and science, despite differences when it comes to explaining why, nevertheless should agree in regard to what is. Why bother talking about God if God has no relation to observable reality? An avalanche of books has been devoted to the controversy between Christianity and evolution. Don’t expect a contribution to that debate here. There are plenty of other places where that conversation occurs. Instead, I’d like to look at Christian faith in the face of evolution as essentially true as most scientists assert. Now I know that just because a particular theory makes sense of the way something could have happened, it doesn’t necessarily mean that it actually happened that way. But if evolution truly provides an accurate description of life on earth, and things did happen the way evolution describes, how might we rethink the way we think about what the Bible says? To rethink what we think about the Bible is not to rewrite Scripture, nor is it to capitulate to Christianity’s detractors. Instead, rethinking and reworking our theology in light of accurate data results in a more dependable and resilient theology. To be a serious Christian is to seek truth and find it as revealed by God both in Scripture and in nature. If God is the maker of heaven and earth, as we believe, then the heavens and earth, as science describes them, have something to say about God. Natural selection need not imply godless selection. To be reliable witnesses of creation can’t help but make us more reliable witnesses to the Creator.
I hope you're intrigued. Go buy the book—you'll love it—then look for occasional conversations here about some of Daniel's ideas.

Steve Matheson, Calvin College

27 August 2008

A pop science book meme

Various book memes have come across my path, and they can be inspiring and interesting. Here's one I chose to pass along because it should result in the evolution of a pretty good list of recommended popular science books. (The originator calls it the "great pop-sci book project.")

If you choose to pass it on, follow the instructions and link to the source, which is Cocktail Party Physics. And thanks to Brian at Laelaps for the heads-up.

The instructions, from Cocktail Party Physics:
1. Highlight those you've read in full
2. Asterisk those you intend to read
3. Add any additional popular science books you think belong on the list
4. Link back to Cocktail Party Physics (leave links or suggested additions in the comments, if you prefer) so I can keep track of everyone's additions. Then we can compile it all into one giant "Top 100" popular science books list, with room for honorable mentions.
And here's the list:

1. Micrographia, Robert Hooke
2. The Origin of Species, Charles Darwin
3. Never at Rest, Richard Westfall
4. Surely You're Joking, Mr. Feynman, Richard Feynman
5. Tesla: Man Out of Time, Margaret Cheney
6. The Devil's Doctor, Philip Ball
7. The Making of the Atomic Bomb, Richard Rhodes
8. Lonely Hearts of the Cosmos, Dennis Overbye
9. Physics for Entertainment, Yakov Perelman
10. 1-2-3 Infinity, George Gamow
11. The Elegant Universe, Brian Greene
12. Warmth Disperses, Time Passes, Hans Christian von Bayer
13. Alice in Quantumland, Robert Gilmore
14. Where Does the Weirdness Go? David Lindley
15. A Short History of Nearly Everything, Bill Bryson
16. A Force of Nature, Richard Rhodes
17. Black Holes and Time Warps, Kip Thorne
18. A Brief History of Time, Stephen Hawking
19. Universal Foam, Sidney Perkowitz
20. Vermeer's Camera, Philip Steadman
21. The Code Book, Simon Singh
22. The Elements of Murder, John Emsley
23. *Soul Made Flesh, Carl Zimmer
24. Time's Arrow, Martin Amis
25. The Ten Most Beautiful Experiments, George Johnson
26. Einstein's Dreams, Alan Lightman
27. *Godel, Escher, Bach, Douglas Hofstadter
28. The Curious Life of Robert Hooke, Lisa Jardine
29. A Matter of Degrees, Gino Segre
30. The Physics of Star Trek, Lawrence Krauss
31. E=mc<2>, David Bodanis
32. Zero: The Biography of a Dangerous Idea, Charles Seife
33. Absolute Zero: The Conquest of Cold, Tom Shachtman
34. A Madman Dreams of Turing Machines, Janna Levin
35. Warped Passages, Lisa Randall
36. Apollo's Fire, Michael Sims
37. Flatland, Edward Abbott
38. Fermat's Last Theorem, Amir Aczel
39. Stiff, Mary Roach
40. Astroturf, M.G. Lord
41. The Periodic Table, Primo Levi
42. *Longitude, Dava Sobel
43. The First Three Minutes, Steven Weinberg
44. The Mummy Congress, Heather Pringle
45. The Accelerating Universe, Mario Livio
46. Math and the Mona Lisa, Bulent Atalay
47. This is Your Brain on Music, Daniel Levitin
48. The Executioner's Current, Richard Moran
49. Krakatoa, Simon Winchester
50. Pythagorus' Trousers, Margaret Wertheim
51. Neuromancer, William Gibson
52. The Physics of Superheroes, James Kakalios
53. The Strange Case of the Broad Street Pump, Sandra Hempel
54. Another Day in the Frontal Lobe, Katrina Firlik
55. Einstein's Clocks and Poincare's Maps, Peter Galison
56. The Demon-Haunted World, Carl Sagan [I've read parts]
57. The Blind Watchmaker, Richard Dawkins
58. *The Language Instinct, Steven Pinker
59. An Instance of the Fingerpost, Iain Pears
60. Consilience, E.O. Wilson
61. Wonderful Life, Stephen J. Gould [I've read most of it]
62. Teaching a Stone to Talk, Annie Dillard
63. Fire in the Brain, Ronald K. Siegel
64. *The Lives of a Cell, Lewis Thomas [I've read excerpts]
65. Coming of Age in the Milky Way, Timothy Ferris
66. Storm World, Chris Mooney
67. The Carbon Age, Eric Roston
68. The Black Hole Wars, Leonard Susskind
69. Copenhagen, Michael Frayn
70. From the Earth to the Moon, Jules Verne [a long, long time ago]
71. Gut Symmetries, Jeanette Winterson
72. *Chaos, James Gleick
73. Innumeracy, John Allen Paulos
74. The Physics of NASCAR, Diandra Leslie-Pelecky
75. Subtle is the Lord, Abraham Pais

Some suggestions and comments:
  • I would probably substitute The Selfish Gene or The Extended Phenotype for The Blind Watchmaker, but The Blind Watchmaker is still a fine choice.
  • Like others, I would include something by Oliver Sacks, probably The Man Who Mistook His Wife for a Hat.
  • I would ditch anything by Carl Sagan, and certainly wouldn't keep The Demon-Haunted World.
  • I wouldn't include two works by one author (e.g., Richard Rhodes) unless they were both surpassingly great.
  • Include The Song of the Dodo by David Quammen and The Beak of the Finch by Jonathan Weiner. Phantoms in the Brain by Ramachandran and Blakeslee gets honorable mention.
  • Any votes for The Fourth Day by Howard Van Till? The Double Helix by James Watson? I'm partial to What Mad Pursuit, Francis Crick's nice memoir. I haven't read Genome by Matt Ridley, but maybe one of his works belongs on the list.
Looking forward to other suggestions.

Summary:
Add The Song of the Dodo, The Beak of the Finch (it won a Pulitzer, people) and The Man Who Mistook His Wife for a Hat. Delete The Demon-Haunted World.

12 June 2008

Weekly sampler 20

Wow, lots going on lately.

1. So, what is a species? The concept is much abused by creationists, so that an already-challenging topic is turned into an abyss of confusion and obfuscation. John Wilkins is a philosopher of science who runs a superb blog over at ScienceBlogs, Evolving Thoughts. He's an expert on this whole species thing, and he recently provided a fascinating commentary on the issue and on a Scientific American essay on the topic by the dashing Carl Zimmer. Warning: spoiler ahead!
So my answer to the question Carl proposes: what is a species? is that a species is something one sees when one realises that two organisms are in the same one. They are natural objects, not mere conveniences, but they are not derived from explanations, but rather they call for them...
2. Oh, speaking of Carl Zimmer, check out this deliciously disturbing story of manipulation in nature, starring some of the creatures that drove Charles Darwin to agnostic distraction: parasitic wasps. Don't read this one at night.

3. Okay, so I've been a little hard on Jim Watson around here. He was "forced out" of his position at Cold Spring Harbor after he was reported to have made some plainly racist statements. Richard Dawkins was indignant, probably because Watson is a fellow atheist who Dawkins fawns over in The God Delusion. I had mixed feelings. On one hand, I was outraged by Watson's nakedly disgusting racist remarks; on the other, I was concerned about the likelihood that his comments on evolution and cognition would be ignored (or worse, rejected) in the uproar.

Well, Watson was recently interviewed by Henry Louis Gates, Jr., at an interesting site called The Root. Watson says that he is "mortified" by "those three sentences in the Sunday Times article." I'm pretty sure all three sentences appear in this paragraph:
He says that he is “inherently gloomy about the prospect of Africa” because “all our social policies are based on the fact that their intelligence is the same as ours – whereas all the testing says not really”, and I know that this “hot potato” is going to be difficult to address. His hope is that everyone is equal, but he counters that “people who have to deal with black employees find this not true”. He says that you should not discriminate on the basis of colour, because “there are many people of colour who are very talented, but don’t promote them when they haven’t succeeded at the lower level”. He writes that “there is no firm reason to anticipate that the intellectual capacities of peoples geographically separated in their evolution should prove to have evolved identically. Our wanting to reserve equal powers of reason as some universal heritage of humanity will not be enough to make it so”.
It seems to me that a discussion of the last two sentences could be quite fruitful; Watson is right about evolution, but wrong about what that must mean about the "equality" of "them."

4. Here's an interesting place to hang out: The Galilean Library. When I first followed a link there, I assumed it was a repository along the lines of Darwin Online. But no: here's how the community is described:
The aim of TGL is to provide a venue for people interested in the sciences and humanities and the possibility of learning more about them in community with others. Its rules are strict, relative to other discussion forums, and standards of expected behaviour are high, but all users need to do is demonstrate a genuine commitment to friendly and respectful dialogue with others in good faith. It consists in a Library of essays, at both introductory and more advanced levels, alongside a Discussion Forum where members of our community meet to converse and debate.
Cool. And yes, they do have stuff by Galileo, including that masterpiece of science-faith dialogue, Letter to the Grand Duchess Christina.

5. Kevin Corcoran unearths ancient secrets of scientific explanation. Now I get it.

6. A slick new Tangled Bank is up at Syaffolee.

7. A recent post in Steve Martin's ongoing series on "Evangelicals, Evolution, and Academics," by Karl Giberson, led to a lengthy and robust discussion there and on the ASA listserv. And a new post in the series, by Gordon Glover, just went up. It has this in-your-face title: "Why Evolution should be taught in Christian schools." Required reading.

8. Hey! My wife and I are looking for scholars (or just friends) in Scotland and/or London who would be willing to help us with our January trip to London and Edinburgh to study Christianity and the Scottish Enlightenment. Doesn't that sound like a great time? Please get in touch if you agree.

9. Reasons To Believe is a morass of misinformation about biology and evolution, but this is a new low: some "guest scholars" have contributed a series on "Evolution as Mythology" which is a rancid concoction of dishonest quote mining and fallacious reasoning that should make any informed Christian seethe. So much for RTB's claim to respect science and scientists; that series is a tour de force of the kind of arrogance-fed ignorance that forms the backbone of the young-earth creationism that RTB claims to eschew. Here's a typically nauseating morsel:
Even though macroevolution seems improbable via the traditional pathway (and regulatory genes are a strong argument for creationism) the myth-like character of neo-Darwinism continues to keep it as the dominant theory. As Behe says, “Most biologists work within a Darwinian framework and simply assume what cannot be demonstrated.”23 Evolutionists even claim regulatory genes make neo-Darwinism more plausible because punctuated equilibrium is more easily explained by regulatory genes, but this only emphasizes how the myth of macroevolution must be protected with religious zeal.
Note to RTB: your intellectual integrity is mediocre at best, and your failures are magnified, not hidden, by your attempts to claim moral high ground in "debates" involving science and faith. Your organization desperately needs reform.

05 June 2008

Clashing Culture: an interesting new conversation

I would bet that many of you have explored Thomas Robey's excellent blog, Hope for Pandora, focused on medicine, science and religion. Apparently bored by the routine of learning (and assisting in) life-saving medical procedures and reflecting on how such events are tied to moral and social debates in this country, Thomas has launched a new blogging community, Clashing Culture (subtitled "Conversations About Science and Faith"), and invited me to be a member. I foolishly agreed. (Foolish because I'm behind on other writing projects, while finally getting active lentiviral vectors in my lab experiments, and still haven't paid off my student loans.)

Thomas describes the endeavor as:
a blogging project where scientists and laymen, Christians and atheists can hold conversations about topics where science and religion converge... My goal is to develop a venue where the authors respect one another but are comfortable laying out their full arguments and critiques.
A worthy goal for sure, and the wonderful Mike from Tangled Up in Blue Guy is already on board, so I agreed to crosspost relevant rants articles from here. Check it out, leave comments, and offer feedback.

01 June 2008

Weekly sampler 19

A few interesting and/or important tidbits for Monday.

1. Brian at Laelaps provides a list of some very useful books available electronically for free. Authors include slouches like Cuvier, Lyell and Huxley.

2. PZ Myers has an excellent new column up at SEED Magazine, discussing the pufferfish genome and referring to Ryan Gregory's excellent work. (Larry Moran adds commentary, and is talking about a poll.) If you need a refresher on "junk DNA" and the worthless creationist arguments it has spawned, note that I've added a Junk DNA tag to my topics list.

3. Steve Martin at An Evangelical Dialogue on Evolution is in the midst of an important and informative series of guest posts on "Evangelicals, Evolution, and Academics." Last week, Richard Colling provided some thoughtful reflections on the delicate art of communicating evolution to believers. (Some of my readers will be glad to know that I read Colling's words carefully.) One early line that caught my eye: "Indeed, an ungodly and consuming fear of evolution has engulfed the Christian community." Up this week: yours truly, on the topic of evolution at Calvin College. I wonder if I should update my CV...

4. James Kidder describes himself thus: "I am a Christian, librarian, palaeoanthropologist, evolutionary biologist and web page designer with an all-consuming interest in apologetics and controversies in science and religion." His blog is called "Science and Religion: A View from an Evolutionary Creationist" and I recommend it very highly.

5. If you can't make it to the Field Museum in Chicago to see the Evolving Planet exhibition...well, first try harder. But if you really can't get there, check out this incredible animation of the Cambrian ocean. Wonderful Life, indeed.

6. Baseball meets intelligent design! On the ASA listserv last week, Randy Isaac posted a link to a video, and asked:
How would we apply the explanatory filter to this video? Can we determine by probabilities whether it was edited? Or designed?
You can read about the explanatory filter elsewhere if you must, but what I really want you to do is to simply watch the video with Randy's questions in mind, and see what you think. Then maybe leave a comment here.

7. Read Ken Miller on Expelled, and why he wasn't interviewed, in the Boston Globe.

8. Monkeys can control robotic arms with "just their thoughts." Whereas my non-robotic limbs are wired directly to my motor cortex, and I seem to have far less control of them than these monkeys do...

The brain of S.S. Korsakov (alt. Korsakoff), a dead Russian genius. From Vein and Maat-Schieman, Brain 131: 583-590, 2008.

Oh, and while we're on the subject of brains, you have to check out this post on brains of dead Russian geniuses. (Where are the brains of dead Russian morons?)

9. Ten optical illusions in two minutes. AWESOME video; don't miss it!

15 May 2008

Weekly sampler 18

1. A nice new Tangled Bank went up yesterday at The Beagle Project Blog, which is a cool site worth visiting at other times, too.

2. Last week saw the unveiling of the Evangelical Manifesto, "an open declaration of who Evangelicals are and what they stand for," which seeks "to rally and to call for reform." The document has sparked some pretty intense discussion among Christians I know. Some of my colleagues at Calvin have denounced it fairly strongly, at least in part due to frustration with evangelical politics. Jamie Smith (another Calvin colleague) has some interesting remarks in three parts (II and III) at Generous Orthodoxy Think Tank, and profitable discussion ensued. Here's one excerpt of clear relevance here:
All too often we have disobeyed the great command to love the Lord our God with our hearts, souls, strength, and minds, and have fallen into an unbecoming anti-intellectualism that is a dire cultural handicap as well as a sin. In particular, some among us have betrayed the strong Christian tradition of a high view of science, epitomized in the very matrix of ideas that gave birth to modern science, and made themselves vulnerable to caricatures of the false hostility between science and faith. By doing so, we have unwittingly given comfort to the unbridled scientism and naturalism that are so rampant in our culture today.
All well and good, but it's the last sentence I don't like. It's certainly true that evangelical credulity and ignorance are potent fuels for New Atheist engines, but in my opinion that's not the primary danger of the malignancy of obscurantism. Evangelical buffoonery on scientific matters betrays a deep and latent gnostic infection – North American evangelicals, in my experience, too frequently veer right to the brink of outright Gnostic heresy. "False hostility between science and faith," it seems to me, is actually real hostility toward the natural world, as evidenced by a pervasive preference for supernatural action as "God's work." I would have written something very different at the end of that paragraph – something sort of like this:
By doing so, we have unwittingly given comfort to the unbridled gnosticism that is so rampant in Christendom today, a great and ancient heresy that cleaves the creation in two, inviting the open degradation of God's good work by those who mistakenly assume that what is natural or material is worthless.
But I do like the document overall, and I agree with one commenter at the Generous Orthodoxy Think Tank who pointed out that it's the discussion of the document that makes it come alive.

3. I'm currently engaged with a discussion on the ASA listserv with one pseudonymous Mike Gene. He's recently published a book, and blogs at a site promoting that book. But wait...he's one design proponent who seems to be swimming clear of the Discovery Institute wreckage, by virtue of uncharacteristic intelligence and intellectual integrity. It's still ID, and I'm not enthused about the pseudonymity, but if you're looking for a pro-ID thinker who actually acts like an adult, Mike Gene is someone to check out. James McGrath gives the book a strongly positive review over at Exploring Our Matrix.

4. ORFans are genes that seem to exist in isolation, say in one or only a few closely-related species. They seem to have just popped into existence in those species, amid a huge common collection of genes shared by, say, all animals. If this sounds weird or interesting to you, go to Panda's Thumb to learn more. (Yes, of course, ID fellows have seized on this as another piece of ignorance on which to build.)

5. Check out someone's illustrated list of the world's 25 weirdest animals. I'm pretty sure I saw Dobby in there.

6. Gordon Glover is continuing his excellent series on science & Christian education. What do the Antipodes have to do with evolution? Are they anywhere near the Antilles or the Galapagos? Well, I'm not going to tell you; Gordon does it better.

7. Publishers Weekly online has a little interview with Ken Miller. He mentions his part in the intriguing new Templeton effort in which they've gotten a collection of big-brained white men (and one woman) to address the question "Does science make belief in God obsolete?" Included is a debate between Miller and Christopher Hitchens.

8. On the ASA web site, Jeffrey Schloss of Westmont College has an extensive review essay on Expelled, "The Expelled Controversy: Overcoming or Raising Walls of Division?" A blog was set up to allow discussion among ASA members (I'm not a member, dang it); not much there yet, but maybe that will change soon.

11 May 2008

Weekly sampler 17

It'll be a breakout week after a slow month on the blog. To the Edge of Evolution – and beyond!

1. Ian Musgrave over at Panda's Thumb provides a nice summary of the evolution of clotting systems and some new genomic data that could be used, by ID proponents like Michael Behe, to bolster their claims regarding the "irreducible complexity" of the clotting system. I've been saying it since the beginning here at QoD: genomic data has already made it nearly impossible to respectably doubt common descent, and it gets much worse every day.

2. Massimo Pigliucci gibbers on the Problem of Evil and Francisco Ayala. Not that I'm buying Ayala's theodicy either...

3. Dale Purves is an eminent neuroscientist whose work I've followed for two decades. In the last several years, he's expanded from developmental neurobiology into cognitive neuroscience. His lab's web page is loaded with good stuff, which is probably why it was recently honored by The Scientist. The resources page includes a bunch of interesting illusions and the full text of two of his out-of-print books.
Ebola virus, electron micrograph. Image from PHIL, ID# 1835.

4. The CDC (Centers for Disease Control & Prevention) has a free online image library called PHIL (Public Health Image Library). Now you know where to go to get your pictures of Ebola Virus for when you make your own Get Well Soon cards. Don't miss this little disclaimer:
WARNING: This library includes subject matter that might be unsuitable for children. Viewing discretion is advised.
Yikes!

5. Get to Gordon Glover's Beyond the Firmament blog for a superb series on "Science and Education" focused on questions surrounding natural science (mostly origins) and Christian education. He's covering folk science right now, in his excellent style. And you don't even have to pay.

6. Last week saw the unveiling of the platypus genome, and it included lots of interesting surprises. The media coverage has been typically spotty (with regard to accuracy); to get well-grounded, start with the brief piece at the New York Times then check out Ryan Gregory's thoughts (at his new blogging home) and perhaps the usual clarity dispensed by the cuddly PZ Myers.